A new robust fault-tolerant controller scheme integrating a main controller and a compensator for the self-repairing flight control system is discussed.The main controller is designed for high performance of the original faultless system.The compensating controller can be seen as a standalone loop added to the system to compensate the effects of fault guaranteeing the stability of the system.A design method is proposed using nonlinear dynamic inverse control as the main controller and nonlinear extended state observer-based compensator.The stability of the whole closed-loop system is analyzed.Feasibility and validity of the new controller is demonstrated with an aircraft simulation example.