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国家重点基础研究发展计划(2011CB911103)

作品数:5 被引量:9H指数:2
相关作者:苏晓东席真周延菲刘祥牛旭晖更多>>
相关机构:北京大学南开大学更多>>
发文基金:国家重点基础研究发展计划国家自然科学基金更多>>
相关领域:生物学理学建筑科学更多>>

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Structural basis of the ultrasensitive calcium indicator GCaMP6被引量:1
2014年
GCaMP is one of the most widely used calcium indicators in neuronal imaging and calcium cell biology. The newly developed GCaMP6 shows superior brightness and ultrasensitivity to calcium concentration change. In this study, we determined crystal structures of CaZ+-bound GCaMP6 monomer and dimer and presented detailed structural analyses in comparison with its par- ent version GCaMP5G. Our analyses reveal the structural basis for the outperformance of this newly developed Ca2+ indicator. Three substitution mutations and the resulting changes of local structure and interaction explain the ultrasensitivity and in- creased fluorescence intensity common to all three versions of GCaMP6. Each particular substitution in the three GCaMP6 is also structurally consistent with their differential sensitivity and intensity, maximizing the potential of using GCaMP6 in solving diverse problems in neuronal research and calcium signaling. Our studies shall also be beneficial to further structure-guided optimization of GCaMP and facilitate the design of novel calcium indicators.
DING JingJinLUO Andrew F.HU LiYanWANG DaChengSHAO Feng
关键词:ULTRASENSITIVITY
Protein-protein complexation in bioluminescence
2011年
In this review we summarize the progress made towards understanding the role of protein-protein interactions in the function of various bioluminescence systems of marine organisms,including bacteria,jellyfish and soft corals,with particular focus on methodology used to detect and characterize these interactions.In some bioluminescence systems,protein-protein interactions involve an“accessory protein”whereby a stored substrate is efficiently delivered to the bioluminescent enzyme luciferase.Other types of complexation mediate energy transfer to an“antenna protein”altering the color and quantum yield of a bioluminescence reaction.Spatial structures of the complexes reveal an important role of electrostatic forces in governing the corresponding weak interactions and define the nature of the interaction surfaces.The most reliable structural model is available for the protein-protein complex of the Ca2+-regulated photoprotein clytin and green-fluorescent protein(GFP)from the jellyfish Clytia gregaria,solved by means of Xray crystallography,NMR mapping and molecular docking.This provides an example of the potential strategies in studying the transient complexes involved in bioluminescence.It is emphasized that structural studies such as these can provide valuable insight into the detailed mechanism of bioluminescence.
Maxim S.TitushinYingang FengJohn LeeEugene S.VysotskiZhi-Jie Liu
关键词:PHOTOPROTEINLUCIFERASEDOCKING
大肠杆菌乙酰羟基酸合酶Ⅰ调控亚基IlvN的结晶及其与配体缬氨酸的共结晶(英文)被引量:1
2012年
乙酰羟基酸合酶(acetohydroxyacid synthase,AHAS)是生物体内支链氨基酸合成通路中的第一个通用酶,它是目前市售多种除草剂的靶标.AHAS通常由分子质量较大的催化亚基和分子质量较小的调控亚基组成.催化亚基结合催化必需的辅基(FAD、ThDP和Mg2+);调控亚基可以结合终产物(缬氨酸、亮氨酸或异亮氨酸)作为负反馈信号调节全酶的活性.大肠杆菌中AHAS有3个同工酶,每种同工酶都由催化亚基和调控亚基组成.大肠杆菌ilvN基因编码了AHAS同工酶Ⅰ的调控亚基.ilvN基因克隆到pET28a表达载体中,在大肠杆菌BL21(DE3)菌株中得到可溶性的大量表达.表达的蛋白质通过镍离子亲和层析和分子筛层析得到纯化.为了对调控亚基的调节机理有深入了解,对IlvN蛋白进行结晶并对蛋白质与其配体缬氨酸进行共结晶.IlvN蛋白晶体衍射能力为2.6魡,IlvN与缬氨酸共结晶的晶体衍射能力为3.0魡.
牛旭晖刘祥周延菲席真苏晓东
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